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Intron Name: Anas_platyrhynchos_platyrhynchos_3_49511218_49522592_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

49511218 - 49522592

Intron Length:

11375

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTGTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTGCAT

U12 Branch Point Sequence:

TCTGCATCAATA

Flanking Amino Acid:

STASTPDTERKLSIHKSSSE

Intron Amino Acid Position:

112

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

0.9

75.1

35.1

Major BPS

62.4

0.31

1.4

73.6

41.8

Major PPT

80.8

0.69

0.9

73.5

41.9

Minor 5ss

33.7

-1.9

3.2

40.4

Minor BPS

49.9

-0

1.9

64.52

42.2

Associated Gene:

Gene:

SASH1

Ensembl Gene ID:

ENSAPLG00000007750

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047436

49387438 - 49572040

184603

ENSAPLT00000044597

49432604 - 49572299

139696

ENSAPLT00000028969

49250747 - 49571131

320385

ENSAPLT00000008063

49453652 - 49572299

118648

ENSAPLT00000048049

49453652 - 49572299

118648