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Intron Name: Anas_platyrhynchos_platyrhynchos_3_49541456_49545433_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

49541456 - 49545433

Intron Length:

3978

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAATCG

5'SS Class:

strong_major

3'SS Sequence:

CGTCCCCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATGAA

U12 Branch Point Sequence:

GAACAGTGACAT

Flanking Amino Acid:

VEEMKKPSTEGVEEHSLDNS

Intron Amino Acid Position:

271

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

68.4

37.4

Major BPS

75.5

0.63

40.9

Major PPT

73.5

0.53

0.8

65.9

30.1

Minor 5ss

37.6

-1.4

3.1

48.3

47.4

Minor BPS

32.9

-1.2

2.1

44.18

38.6

Associated Gene:

Gene:

SASH1

Ensembl Gene ID:

ENSAPLG00000007750

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044597

49432604 - 49572299

139696

ENSAPLT00000033552

49276535 - 49571131

294597

ENSAPLT00000028969

49250747 - 49571131

320385

ENSAPLT00000048049

49453652 - 49572299

118648

ENSAPLT00000008063

49453652 - 49572299

118648

ENSAPLT00000047436

49387438 - 49572040

184603