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Intron Name: Anas_platyrhynchos_platyrhynchos_3_49545781_49549493_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

49545781 - 49549493

Intron Length:

3713

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGTACA

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTTATGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TCTTTTTTATGC

Flanking Amino Acid:

KKSLGSLSHGDDYDKLHQCI

Intron Amino Acid Position:

372

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.5

0.88

0.9

80.7

33.8

Major BPS

96.5

1.15

0.6

34.2

Major PPT

88.1

0.86

0.8

84.8

28.9

Minor 5ss

35.6

-1.6

2.6

35.6

40.5

Minor BPS

51.8

0.04

1.9

64.74

41.8

Associated Gene:

Gene:

SASH1

Ensembl Gene ID:

ENSAPLG00000007750

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044597

49432604 - 49572299

139696

ENSAPLT00000033552

49276535 - 49571131

294597

ENSAPLT00000028969

49250747 - 49571131

320385

ENSAPLT00000048049

49453652 - 49572299

118648

ENSAPLT00000047436

49387438 - 49572040

184603