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Intron Name: Anas_platyrhynchos_platyrhynchos_3_49545781_49550196_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

49545781 - 49550196

Intron Length:

4416

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGTACA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

TGTGATAGAACT

Flanking Amino Acid:

KKSLGSLSHGRTCSFGGFDL

Intron Amino Acid Position:

387

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.5

0.88

0.9

80.7

33.8

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

1.1

0.4

13.8

Minor 5ss

35.6

-1.6

2.6

35.6

40.5

Minor BPS

45.7

-0.2

1.9

67.75

42.5

Associated Gene:

Gene:

SASH1

Ensembl Gene ID:

ENSAPLG00000007750

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008063

49453652 - 49572299

118648