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Intron Name: Anas_platyrhynchos_platyrhynchos_3_49549623_49550196_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

49549623 - 49550196

Intron Length:

574

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAATACC

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

TGTGATAGAACT

Flanking Amino Acid:

ELPCATRGVMRTCSFGGFDL

Intron Amino Acid Position:

415

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

73.9

34.6

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

1.1

0.4

13.8

Minor 5ss

36.5

-1.5

2.8

43.6

37.8

Minor BPS

45.7

-0.2

1.9

67.75

42.5

Associated Gene:

Gene:

SASH1

Ensembl Gene ID:

ENSAPLG00000007750

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033552

49276535 - 49571131

294597

ENSAPLT00000028969

49250747 - 49571131

320385

ENSAPLT00000048049

49453652 - 49572299

118648

ENSAPLT00000047436

49387438 - 49572040

184603

ENSAPLT00000044597

49432604 - 49572299

139696