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Intron Name: Anas_platyrhynchos_platyrhynchos_3_49550269_49552680_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

49550269 - 49552680

Intron Length:

2412

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTATA

5'SS Class:

strong_major

3'SS Sequence:

GTTTGTTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

TAGGTGTTAACC

Flanking Amino Acid:

LHIGNNSDQMGKEGDFVYKE

Intron Amino Acid Position:

411

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.8

84.9

26.2

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

0.81

0.8

79.9

37.7

Minor 5ss

-1.8

2.8

39.2

40.5

Minor BPS

49.7

-0

2.1

62.49

43.3

Associated Gene:

Gene:

SASH1

Ensembl Gene ID:

ENSAPLG00000007750

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033552

49276535 - 49571131

294597

ENSAPLT00000028969

49250747 - 49571131

320385

ENSAPLT00000048049

49453652 - 49572299

118648

ENSAPLT00000008063

49453652 - 49572299

118648

ENSAPLT00000047436

49387438 - 49572040

184603

ENSAPLT00000044597

49432604 - 49572299

139696