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Intron Name: Anas_platyrhynchos_platyrhynchos_3_49555160_49556171_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

49555160 - 49556171

Intron Length:

1012

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGA|GTAAGTCCT

5'SS Class:

major

3'SS Sequence:

TACATGTGCTTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATATTAA

U12 Branch Point Sequence:

CTGATATTAAGT

Flanking Amino Acid:

RSSLSGQSSMSGQTVSTTDS

Intron Amino Acid Position:

504

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.5

0.6

1.1

69.1

41.8

Major BPS

66.7

0.42

58.1

38.5

Major PPT

59.9

0.22

57.7

42.8

Minor 5ss

38.1

-1.3

48.4

41.1

Minor BPS

-0

1.9

64.99

45.5

Associated Gene:

Gene:

SASH1

Ensembl Gene ID:

ENSAPLG00000007750

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044597

49432604 - 49572299

139696

ENSAPLT00000033552

49276535 - 49571131

294597

ENSAPLT00000028969

49250747 - 49571131

320385

ENSAPLT00000048049

49453652 - 49572299

118648

ENSAPLT00000008063

49453652 - 49572299

118648

ENSAPLT00000047436

49387438 - 49572040

184603