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Intron Name: Anas_platyrhynchos_platyrhynchos_3_49556342_49557353_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

49556342 - 49557353

Intron Length:

1012

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACCAGCT

5'SS Class:

major

3'SS Sequence:

CTTTGGTCTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATGAC

U12 Branch Point Sequence:

CATGCCTAAATG

Flanking Amino Acid:

PYDTDSLKLKKGDIIDIISK

Intron Amino Acid Position:

561

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.3

0.43

1.2

63.6

41.2

Major BPS

58.2

0.2

49.5

35.1

Major PPT

75.4

0.57

0.9

69.6

36.8

Minor 5ss

37.5

-1.4

3.6

57.4

46.7

Minor BPS

51.1

-0.1

1.9

55.78

Associated Gene:

Gene:

SASH1

Ensembl Gene ID:

ENSAPLG00000007750

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044597

49432604 - 49572299

139696

ENSAPLT00000033552

49276535 - 49571131

294597

ENSAPLT00000028969

49250747 - 49571131

320385

ENSAPLT00000048049

49453652 - 49572299

118648

ENSAPLT00000008063

49453652 - 49572299

118648

ENSAPLT00000047436

49387438 - 49572040

184603