Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_49896188_49897449_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

49896188 - 49897449

Intron Length:

1262

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACTGTAT

5'SS Class:

major

3'SS Sequence:

TTTCATGTCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

CTTATCTTATCT

Flanking Amino Acid:

FLGPVPPKPKDQRSIVKTPK

Intron Amino Acid Position:

651

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.8

0.51

1.1

68.7

38.6

Major BPS

87.6

0.93

0.9

89.3

Major PPT

77.8

0.63

0.9

37.7

Minor 5ss

37.4

-1.4

3.5

55.6

48.6

Minor BPS

64.1

0.52

1.7

80.04

42.1

Associated Gene:

Gene:

TAB2

Ensembl Gene ID:

ENSAPLG00000008173

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042082

49884880 - 49897595

12716

ENSAPLT00000035590

49880538 - 49897595

17058

ENSAPLT00000008484

49880538 - 49897595

17058