Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_49923452_49923963_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

49923452 - 49923963

Intron Length:

512

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTATATACT

5'SS Class:

major

3'SS Sequence:

CTCCCACCTGAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

TATTTCTGATCT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.9

0.49

1.1

70.4

39.7

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

61.7

0.26

60.6

28.5

Minor 5ss

43.4

-0.7

2.6

52.1

44.7

Minor BPS

0.49

1.7

81.93

39.2

Associated Gene:

Gene:

ZC3H12D

Ensembl Gene ID:

ENSAPLG00000008379

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008703

49914971 - 49924124

9154