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Intron Name: Anas_platyrhynchos_platyrhynchos_3_49977890_49979012_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

49977890 - 49979012

Intron Length:

1123

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGATTGGA

5'SS Class:

major

3'SS Sequence:

TTGCTTTCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTCAG

U12 Branch Point Sequence:

TCTGCTTTATCT

Flanking Amino Acid:

EKLVRLLFEMARFYAPTTIF

Intron Amino Acid Position:

301

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.3

0.53

37.1

Major BPS

67.2

0.43

1.5

77.4

37.3

Major PPT

86.4

0.82

0.7

84.9

29.9

Minor 5ss

26.8

-2.7

29.1

Minor BPS

63.4

0.5

1.7

79.06

43.7

Associated Gene:

Gene:

KATNA1

Ensembl Gene ID:

ENSAPLG00000008891

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009282

49971549 - 49986635

15087