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Intron Name: Anas_platyrhynchos_platyrhynchos_3_49979172_49979383_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

49979172 - 49979383

Intron Length:

212

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGAAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTATCTTAATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTATCTTAATA

Flanking Amino Acid:

FFKGIRRPWKGVLMVGPPGT

Intron Amino Acid Position:

248

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

78.7

29.9

Major BPS

96.5

1.15

0.6

34.2

Major PPT

77.3

0.61

0.9

74.2

35.2

Minor 5ss

38.9

-1.3

2.8

48.3

47.4

Minor BPS

78.8

0.9

1.1

83.66

30.1

Associated Gene:

Gene:

KATNA1

Ensembl Gene ID:

ENSAPLG00000008891

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009282

49971549 - 49986635

15087