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Intron Name: Anas_platyrhynchos_platyrhynchos_3_49985772_49986460_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

49985772 - 49986460

Intron Length:

689

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATAAT

5'SS Class:

strong_major

3'SS Sequence:

TTCTATTTATCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCTAT

U12 Branch Point Sequence:

TTTTTTCTATTT

Flanking Amino Acid:

DTYLQQKWQQVWQEISVEAK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

89.4

23.3

Major BPS

73.8

0.59

1.3

72.8

Major PPT

81.6

0.71

0.9

81.6

34.4

Minor 5ss

36.8

-1.5

2.9

50.6

45.9

Minor BPS

54.8

0.23

1.9

79.65

37.1

Associated Gene:

Gene:

KATNA1

Ensembl Gene ID:

ENSAPLG00000008891

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009282

49971549 - 49986635

15087