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Intron Name: Anas_platyrhynchos_platyrhynchos_3_50017368_50018630_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

50017368 - 50018630

Intron Length:

1263

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGATA

5'SS Class:

strong_major

3'SS Sequence:

CCCTTTCTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTTAT

U12 Branch Point Sequence:

ATTTCCCCATTT

Flanking Amino Acid:

ISEKPSFLHQGGRSTTYLSH

Intron Amino Acid Position:

329

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.7

1.01

0.8

87.8

27.9

Major BPS

74.8

0.62

0.9

63.7

35.1

Major PPT

81.6

0.71

0.7

80.2

25.2

Minor 5ss

35.8

-1.6

3.3

48.1

47.6

Minor BPS

49.1

0.01

2.1

75.68

Associated Gene:

Gene:

NUP43

Ensembl Gene ID:

ENSAPLG00000028569

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043930

50016277 - 50025019

8743