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Intron Name: Anas_platyrhynchos_platyrhynchos_3_50018754_50020347_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

50018754 - 50020347

Intron Length:

1594

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTGAGTATC

5'SS Class:

major

3'SS Sequence:

TCGATACTTACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

GTTTGTTTATTT

Flanking Amino Acid:

VSLLNAHEAEMWEVHFHPSN

Intron Amino Acid Position:

288

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.4

0.57

35.1

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

73.3

0.52

65.5

40.1

Minor 5ss

36.1

-1.6

2.8

42.3

38.4

Minor BPS

54.6

0.22

76.04

41.4

Associated Gene:

Gene:

NUP43

Ensembl Gene ID:

ENSAPLG00000028569

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043930

50016277 - 50025019

8743