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Intron Name: Anas_platyrhynchos_platyrhynchos_3_50020500_50021314_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

50020500 - 50021314

Intron Length:

815

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTAAGATCC

5'SS Class:

major

3'SS Sequence:

TTCTCCCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATATAT

U12 Branch Point Sequence:

ATATATATATTT

Flanking Amino Acid:

QRNEPSQIFSLTGERVPLHC

Intron Amino Acid Position:

237

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.1

0.5

1.1

64.3

34.5

Major BPS

71.4

0.53

67.3

39.3

Major PPT

86.3

0.82

0.7

80.9

24.2

Minor 5ss

41.8

-0.9

58.2

40.2

Minor BPS

45.6

-0.2

1.9

65.18

39.4

Associated Gene:

Gene:

NUP43

Ensembl Gene ID:

ENSAPLG00000028569

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043930

50016277 - 50025019

8743