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Intron Name: Anas_platyrhynchos_platyrhynchos_3_50023409_50024304_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

50023409 - 50024304

Intron Length:

896

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTACC

5'SS Class:

strong_major

3'SS Sequence:

GGTTGCTATTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTTAAC

U12 Branch Point Sequence:

AACAGCAGAATT

Flanking Amino Acid:

TVFRHHQNNQTLSVNQRWEK

Intron Amino Acid Position:

133

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

0.9

74.9

35.3

Major BPS

68.3

0.45

69.6

32.8

Major PPT

66.4

0.37

63.1

43.3

Minor 5ss

30.2

-2.3

2.9

36.9

40.4

Minor BPS

41.1

-0.6

54.36

Associated Gene:

Gene:

NUP43

Ensembl Gene ID:

ENSAPLG00000028569

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043930

50016277 - 50025019

8743