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Intron Name: Anas_platyrhynchos_platyrhynchos_3_50024383_50024605_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

50024383 - 50024605

Intron Length:

223

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACACGG

5'SS Class:

major

3'SS Sequence:

TCTCTTTATAAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

TGCTCGTTATCT

Flanking Amino Acid:

GHDGDVMDMQFLDQERIVVG

Intron Amino Acid Position:

107

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.6

0.56

1.2

57.3

47.4

Major BPS

83.9

0.84

73.9

41.3

Major PPT

72.7

0.51

1.1

74.6

33.1

Minor 5ss

36.9

-1.5

3.1

48.4

47.1

Minor BPS

53.6

0.19

2.3

76.39

Associated Gene:

Gene:

NUP43

Ensembl Gene ID:

ENSAPLG00000028569

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043930

50016277 - 50025019

8743