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Intron Name: Anas_platyrhynchos_platyrhynchos_3_50024717_50024812_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

50024717 - 50024812

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCGGC

5'SS Class:

strong_major

3'SS Sequence:

GTTCTCCGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGTTGAT

U12 Branch Point Sequence:

GGAGCGTTGATG

Flanking Amino Acid:

IFATGSWDNEDNRLALWAVG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

66.6

39.6

Major BPS

68.9

0.47

1.2

60.7

45.9

Major PPT

75.4

0.57

0.9

69.6

36.7

Minor 5ss

31.2

-2.1

3.3

41.1

45.6

Minor BPS

43.5

-0.6

2.1

44.3

41.9

Associated Gene:

Gene:

NUP43

Ensembl Gene ID:

ENSAPLG00000028569

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043930

50016277 - 50025019

8743