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Intron Name: Anas_platyrhynchos_platyrhynchos_3_50199585_50200447_F

Intron Information:

Intron Rank:

131351

Intron Class:

major

Intron Phase:

Intron Coordinates:

50199585 - 50200447

Intron Length:

863

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTGTC

5'SS Class:

strong_major

3'SS Sequence:

TTGTCCTTCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTAAC

U12 Branch Point Sequence:

TAACCGGCATAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.9

81.2

32.7

Major BPS

69.4

0.48

1.1

69.6

35.5

Major PPT

82.5

0.73

0.8

80.8

31.1

Minor 5ss

35.9

-1.6

3.5

51.5

45.7

Minor BPS

31.5

-1.3

2.5

49.34

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020560

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035741

50198788 - 50214458

15671