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Intron Name: Anas_platyrhynchos_platyrhynchos_3_50240557_50242438_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

50240557 - 50242438

Intron Length:

1882

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGAAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

ATGTCTTTAATG

Flanking Amino Acid:

DKWVNDLKRLRTNWIKEYLD

Intron Amino Acid Position:

174

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

78.7

29.9

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

95.8

1.03

0.5

92.1

18.3

Minor 5ss

38.9

-1.3

2.8

48.3

47.4

Minor BPS

72.5

0.57

1.3

69.26

38.9

Associated Gene:

Gene:

IYD

Ensembl Gene ID:

ENSAPLG00000009957

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025600

50227849 - 50244844

16996

ENSAPLT00000010365

50227849 - 50244844

16996