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Intron Name: Anas_platyrhynchos_platyrhynchos_3_50309929_50326702_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

50309929 - 50326702

Intron Length:

16774

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTTGGAAG

5'SS Class:

major

3'SS Sequence:

TCTCCTTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTAAT

U12 Branch Point Sequence:

TTTTCTCTAATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.6

0.46

1.2

63.4

42.2

Major BPS

82.2

0.8

0.9

81.6

Major PPT

88.3

0.86

0.7

25.5

Minor 5ss

34.1

-1.8

2.9

39.5

46.1

Minor BPS

0.86

1.6

92.5

29.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029816

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032241

50309682 - 50430662

120981