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Intron Name: Anas_platyrhynchos_platyrhynchos_3_50326772_50351989_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

50326772 - 50351989

Intron Length:

25218

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TTCTGTCCGTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAAGAA

U12 Branch Point Sequence:

TTTTCTTTCCTT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

75.3

34.6

Major BPS

58.2

0.21

1.1

55.4

40.4

Major PPT

69.9

0.45

0.9

70.2

36.5

Minor 5ss

30.4

-2.2

3.2

42.4

44.3

Minor BPS

46.1

-0.2

3.6

82.98

39.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029816

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032241

50309682 - 50430662

120981