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Intron Name: Anas_platyrhynchos_platyrhynchos_3_50429640_50430087_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

50429640 - 50430087

Intron Length:

448

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGAATT

5'SS Class:

strong_major

3'SS Sequence:

GTTGTGTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTTAA

U12 Branch Point Sequence:

GATACTTAAACA

Flanking Amino Acid:

IYTQYCTNYPRSVAVLTECM

Intron Amino Acid Position:

269

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

84.6

33.3

Major BPS

74.4

0.61

0.9

63.9

34.9

Major PPT

80.6

0.69

0.9

76.9

42.1

Minor 5ss

-1.4

3.4

57.1

47.2

Minor BPS

57.1

0.22

1.7

66.09

40.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029816

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032241

50309682 - 50430662

120981