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Intron Name: Anas_platyrhynchos_platyrhynchos_3_50443605_50445742_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

50443605 - 50445742

Intron Length:

2138

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTATGTTAA

5'SS Class:

strong_major

3'SS Sequence:

CTCTCTTCTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTAAA

U12 Branch Point Sequence:

TCATGTTAAATC

Flanking Amino Acid:

EEKKQGGPAIGARIAEYSQL

Intron Amino Acid Position:

803

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

0.9

74.6

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

80.1

0.68

0.7

73.1

31.8

Minor 5ss

45.7

-0.4

2.5

54.4

45.2

Minor BPS

47.6

-0.2

58.02

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010066

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010514

50433736 - 50448948

15213