Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_50457165_50458261_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

50457165 - 50458261

Intron Length:

1097

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCACTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATT

Flanking Amino Acid:

NAVKPEKDVDGLSDVNLGRL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.86

0.9

77.6

32.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

84.3

0.77

0.8

78.8

28.3

Minor 5ss

31.6

-2.1

3.1

31.7

42.6

Minor BPS

84.9

1.17

0.8

94.97

24.6

Associated Gene:

Gene:

MTHFD1L

Ensembl Gene ID:

ENSAPLG00000010485

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047959

50453962 - 50592559

138598

ENSAPLT00000010984

50453962 - 50592559

138598