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Intron Name: Anas_platyrhynchos_platyrhynchos_3_50497556_50506375_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

50497556 - 50506375

Intron Length:

8820

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTATGTTCA

5'SS Class:

strong_major

3'SS Sequence:

TCTTGTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAAAAT

U12 Branch Point Sequence:

AATTCCTTAAAA

Flanking Amino Acid:

KGEPVTAEDLGVTGALAVLM

Intron Amino Acid Position:

540

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

0.9

72.1

33.4

Major BPS

70.6

0.51

1.1

75.9

34.4

Major PPT

85.6

0.8

0.7

84.6

30.4

Minor 5ss

46.7

-0.3

2.4

43.5

Minor BPS

78.4

0.89

1.2

80.96

33.5

Associated Gene:

Gene:

MTHFD1L

Ensembl Gene ID:

ENSAPLG00000010485

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033739

50454266 - 50592559

138294

ENSAPLT00000010984

50453962 - 50592559

138598

ENSAPLT00000047959

50453962 - 50592559

138598