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Intron Name: Anas_platyrhynchos_platyrhynchos_3_50497556_50511952_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

50497556 - 50511952

Intron Length:

14397

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTATGTTCA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTATTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATTTTTTTATTC

Flanking Amino Acid:

KGEPVTAEDLGTPVFVHAGP

Intron Amino Acid Position:

579

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

0.9

72.1

33.4

Major BPS

96.5

1.15

0.6

34.2

Major PPT

92.8

0.96

0.7

23.9

Minor 5ss

46.7

-0.3

2.4

43.5

Minor BPS

62.9

0.38

1.5

71.66

Associated Gene:

Gene:

MTHFD1L

Ensembl Gene ID:

ENSAPLG00000010485

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047363

50454266 - 50592559

138294