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Intron Name: Anas_platyrhynchos_platyrhynchos_3_50512065_50532225_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

50512065 - 50532225

Intron Length:

20161

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGTAGT

5'SS Class:

strong_major

3'SS Sequence:

TAATGTTTAACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TGTTTTTTAATG

Flanking Amino Acid:

LKLVGEKGFVVTEAGFGADI

Intron Amino Acid Position:

600

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

79.6

35.4

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

71.2

0.48

66.1

43.7

Minor 5ss

32.1

-2

2.8

39.3

41.2

Minor BPS

72.1

0.55

1.2

71.21

36.3

Associated Gene:

Gene:

MTHFD1L

Ensembl Gene ID:

ENSAPLG00000010485

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033739

50454266 - 50592559

138294

ENSAPLT00000010984

50453962 - 50592559

138598

ENSAPLT00000047959

50453962 - 50592559

138598

ENSAPLT00000047363

50454266 - 50592559

138294