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Intron Name: Anas_platyrhynchos_platyrhynchos_3_50704291_50706402_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

50704291 - 50706402

Intron Length:

2112

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTTAA

5'SS Class:

strong_major

3'SS Sequence:

CTCTGTGTTACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAC

U12 Branch Point Sequence:

GCTTTGTCACCT

Flanking Amino Acid:

FAFSNALCLSVKLAIWESLL

Intron Amino Acid Position:

310

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.2

0.92

0.8

26.1

Major BPS

74.9

0.62

1.1

77.4

37.4

Major PPT

77.9

0.63

0.9

71.2

38.5

Minor 5ss

39.7

-1.2

2.8

45.9

43.7

Minor BPS

43.6

-0.4

2.4

63.97

46.4

Associated Gene:

Gene:

RMND1

Ensembl Gene ID:

ENSAPLG00000011834

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012320

50700711 - 50719658

18948