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Intron Name: Anas_platyrhynchos_platyrhynchos_3_50725176_50726176_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

50725176 - 50726176

Intron Length:

1001

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAACTTG

5'SS Class:

strong_major

3'SS Sequence:

TTCCTCATTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTCAT

U12 Branch Point Sequence:

TCTTCCTCATTC

Flanking Amino Acid:

LQEEFFKLLQVSLWGNKCDL

Intron Amino Acid Position:

195

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

72.1

40.4

Major BPS

82.3

0.8

0.9

81.8

30.8

Major PPT

77.9

0.63

0.8

70.4

34.9

Minor 5ss

46.8

-0.3

2.9

64.1

47.4

Minor BPS

58.7

0.25

1.8

70.35

41.6

Associated Gene:

Gene:

ARMT1

Ensembl Gene ID:

ENSAPLG00000011927

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012416

50721624 - 50726944

5321