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Intron Name: Anas_platyrhynchos_platyrhynchos_3_50766887_50771409_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

50766887 - 50771409

Intron Length:

4523

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATA|GTAAGTCAG

5'SS Class:

major

3'SS Sequence:

GCTTGCTCCCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACCTAAC

U12 Branch Point Sequence:

CTAACCCTATAT

Flanking Amino Acid:

INCKEESKEIMVSQFETQIA

Intron Amino Acid Position:

356

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.6

0.6

64.3

41.6

Major BPS

63.2

0.33

63.6

30.5

Major PPT

67.2

0.39

0.9

58.3

38.4

Minor 5ss

35.4

-1.7

2.9

42.9

39.2

Minor BPS

45.5

-0.2

63.98

45.4

Associated Gene:

Gene:

CCDC170

Ensembl Gene ID:

ENSAPLG00000011938

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012426

50744390 - 50780236

35847