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Intron Name: Anas_platyrhynchos_platyrhynchos_3_50774984_50775873_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

50774984 - 50775873

Intron Length:

890

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTTAA

5'SS Class:

strong_major

3'SS Sequence:

TTGGTTATTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAC

U12 Branch Point Sequence:

TTAACATTGATT

Flanking Amino Acid:

AKLSETNELKIQTLEQNRTI

Intron Amino Acid Position:

562

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.8

1.01

0.7

85.4

19.4

Major BPS

80.9

0.77

0.8

81.7

25.4

Major PPT

79.7

0.67

0.9

74.1

40.3

Minor 5ss

34.1

-1.8

2.8

39.9

46.1

Minor BPS

60.4

0.41

1.6

78.08

37.9

Associated Gene:

Gene:

CCDC170

Ensembl Gene ID:

ENSAPLG00000011938

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012426

50744390 - 50780236

35847