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Intron Name: Anas_platyrhynchos_platyrhynchos_3_50823258_50824139_R

Intron Information:

Intron Rank:

134169

Intron Class:

major

Intron Phase:

Intron Coordinates:

50823258 - 50824139

Intron Length:

882

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

CTCTTTCTGTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TTAATTTTACTC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

0.9

74.8

29.7

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

79.7

0.67

0.9

80.3

31.8

Minor 5ss

27.5

-2.6

2.7

28.2

37.3

Minor BPS

52.4

0.06

1.6

62.9

37.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019477

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034602

50811071 - 50874673

63603

ENSAPLT00000019499

50811967 - 50874673

62707