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Intron Name: Anas_platyrhynchos_platyrhynchos_3_50824182_50874496_R

Intron Information:

Intron Rank:

134170

Intron Class:

major

Intron Phase:

Intron Coordinates:

50824182 - 50874496

Intron Length:

50315

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGCACT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTATTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATTTCTTTCATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

75.3

40.8

Major BPS

96.5

1.15

0.6

34.2

Major PPT

93.4

0.98

0.7

89.1

26.3

Minor 5ss

41.6

-0.9

2.9

45.2

Minor BPS

69.2

0.69

1.7

85.82

34.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019477

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034602

50811071 - 50874673

63603

ENSAPLT00000019499

50811967 - 50874673

62707