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Intron Name: Anas_platyrhynchos_platyrhynchos_3_50906161_50918902_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

50906161 - 50918902

Intron Length:

12742

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATAAGC

5'SS Class:

strong_major

3'SS Sequence:

TCTGTTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTTAC

U12 Branch Point Sequence:

GTGTCCTTACTT

Flanking Amino Acid:

CKAFFKRSIQGHNDYMCPAT

Intron Amino Acid Position:

168

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

71.8

38.2

Major BPS

68.9

0.47

59.6

38.6

Major PPT

87.8

0.85

0.8

80.2

37.3

Minor 5ss

33.9

-1.8

2.9

44.3

Minor BPS

68.5

0.66

1.6

80.43

41.9

Associated Gene:

Gene:

ESR1

Ensembl Gene ID:

ENSAPLG00000004585

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004741

50874694 - 50985278

110585