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Intron Name: Anas_platyrhynchos_platyrhynchos_3_51017769_51020564_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

51017769 - 51020564

Intron Length:

2796

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTATAGCAG

5'SS Class:

weak_major

3'SS Sequence:

TTTTTTGATACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TTTTGTTTATTT

Flanking Amino Acid:

EKDFYLRGAARESSELEAHI

Intron Amino Acid Position:

414

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.6

0.23

1.1

49.2

41.2

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

84.8

0.78

0.9

80.6

36.1

Minor 5ss

37.3

-1.4

3.4

46.1

43.8

Minor BPS

60.4

0.41

83.14

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017771

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046126

51000107 - 51040038

39932