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Intron Name: Anas_platyrhynchos_platyrhynchos_3_51158067_51163037_R

Intron Information:

Intron Rank:

Intron Class:

minor-like

Intron Phase:

Intron Coordinates:

51158067 - 51163037

Intron Length:

4971

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATT|GTATTTTTT

5'SS Class:

weak_minor

3'SS Sequence:

ATACCCATTGCAG|G

3'SS Class:

minor_hybrid

U2 Branch Point Sequence:

ACTTAAT

U12 Branch Point Sequence:

TTGTACATTACA

Flanking Amino Acid:

KLNFINFHWGLYKFVYYM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.26

1.1

68.1

37.1

Major BPS

78.2

0.7

77.9

32.1

Major PPT

70.9

0.47

0.9

63.3

37.2

Minor 5ss

0.57

2.2

81.3

32.1

Minor BPS

49.6

-0

2.1

69.64

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029426

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021868

51157873 - 51163062

5190