Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_51205127_51206685_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

51205127 - 51206685

Intron Length:

1559

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACAGATT

5'SS Class:

major

3'SS Sequence:

TCATTAACTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATCAT

U12 Branch Point Sequence:

TTATCATTAACT

Flanking Amino Acid:

FKGLLDLLAEIEKTLGTLGD

Intron Amino Acid Position:

1223

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.5

0.58

1.1

39.4

Major BPS

88.2

0.95

0.9

88.3

28.5

Major PPT

69.9

0.45

0.9

64.1

36.6

Minor 5ss

36.5

-1.5

3.6

47.3

Minor BPS

80.9

1.05

1.5

94.67

31.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006495

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006751

51201436 - 51258543

57108