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Intron Name: Anas_platyrhynchos_platyrhynchos_3_51207944_51210542_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

51207944 - 51210542

Intron Length:

2599

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAGTGAC

5'SS Class:

strong_major

3'SS Sequence:

AAAATATTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAA

U12 Branch Point Sequence:

AATTCTTAAAAA

Flanking Amino Acid:

AVRKLHRQWKDKIPCAANHG

Intron Amino Acid Position:

579

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

1.1

31.8

Major BPS

82.2

0.8

71.9

35.8

Major PPT

62.4

0.28

51.7

46.1

Minor 5ss

29.3

-2.4

2.9

35.1

41.4

Minor BPS

57.8

0.24

1.7

68.19

37.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006495

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039438

51207902 - 51230613

22712