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Intron Name: Anas_platyrhynchos_platyrhynchos_3_51209647_51210542_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

51209647 - 51210542

Intron Length:

896

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAGTGAC

5'SS Class:

strong_major

3'SS Sequence:

TGTGGGAATGTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTGTTAT

U12 Branch Point Sequence:

TTCTTGTTTATT

Flanking Amino Acid:

AVRKLHRQWKDLQTEAPYHL

Intron Amino Acid Position:

1009

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

1.1

31.8

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

56.1

0.14

1.1

48.4

44.1

Minor 5ss

29.3

-2.4

2.9

35.1

41.4

Minor BPS

49.3

0.03

2.3

74.73

42.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006495

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006751

51201436 - 51258543

57108