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Intron Name: Anas_platyrhynchos_platyrhynchos_3_51213479_51214464_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

51213479 - 51214464

Intron Length:

986

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTTTA

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCTTTAT

U12 Branch Point Sequence:

GTGGATATATGT

Flanking Amino Acid:

PTILLKQKAQDLVAYQENCK

Intron Amino Acid Position:

856

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.9

0.8

86.9

22.7

Major BPS

71.5

0.54

1.1

63.3

42.8

Major PPT

93.2

0.97

0.6

92.2

18.2

Minor 5ss

45.5

-0.5

2.8

58.5

40.4

Minor BPS

36.4

-0.9

49.94

43.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006495

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039438

51207902 - 51230613

22712

ENSAPLT00000006751

51201436 - 51258543

57108