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Intron Name: Anas_platyrhynchos_platyrhynchos_3_51220972_51224829_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

51220972 - 51224829

Intron Length:

3858

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATT|GTAAGTTGG

5'SS Class:

major

3'SS Sequence:

TTTTTCCTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

CTATCTTTATTT

Flanking Amino Acid:

SVELLLQNYISVIENSKFFE

Intron Amino Acid Position:

551

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.2

0.57

1.1

64.4

42.2

Major BPS

83.9

0.84

73.9

41.3

Major PPT

94.5

0.5

93.1

Minor 5ss

42.2

-0.9

2.8

55.2

43.3

Minor BPS

63.5

0.5

1.6

76.15

41.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006495

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039438

51207902 - 51230613

22712

ENSAPLT00000006751

51201436 - 51258543

57108

ENSAPLT00000006745

51213390 - 51258543

45154