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Intron Name: Anas_platyrhynchos_platyrhynchos_3_51224856_51228877_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

51224856 - 51228877

Intron Length:

4022

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTGCATTAT

5'SS Class:

weak_major

3'SS Sequence:

AGGCGAGAATCAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTATCAA

U12 Branch Point Sequence:

GGATTATCAAAT

Flanking Amino Acid:

QLKVNIHAFILGTTTSKLYC

Intron Amino Acid Position:

471

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

53.4

0.08

1.1

57.8

37.4

Major BPS

0.72

80.3

31.7

Major PPT

47.1

-0.1

1.1

37.6

43.1

Minor 5ss

37.6

-1.4

3.4

57.6

47.1

Minor BPS

46.1

-0.2

1.8

61.61

41.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006495

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040657

51224792 - 51259978

35187

ENSAPLT00000020606

51224792 - 51258543

33752