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Intron Name: Anas_platyrhynchos_platyrhynchos_3_51225685_51228900_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

51225685 - 51228900

Intron Length:

3216

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATATA

5'SS Class:

strong_major

3'SS Sequence:

CCTTAAAAAACAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTAAAAA

U12 Branch Point Sequence:

CTCTCCTTAAAA

Flanking Amino Acid:

IIHRKLEQLKDLLKNIEGHK

Intron Amino Acid Position:

457

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.8

89.5

23.2

Major BPS

61.4

0.28

1.1

67.9

34.4

Major PPT

58.6

0.19

1.1

52.4

39.5

Minor 5ss

38.7

-1.3

2.9

50.9

45.5

Minor BPS

74.1

0.75

1.4

76.43

40.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006495

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006751

51201436 - 51258543

57108

ENSAPLT00000006745

51213390 - 51258543

45154