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Intron Name: Anas_platyrhynchos_platyrhynchos_3_51232605_51238965_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

51232605 - 51238965

Intron Length:

6361

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TAT|GCAAATCAG

5'SS Class:

major

3'SS Sequence:

TCCAACCAACTAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTGTTAT

U12 Branch Point Sequence:

TGTTATGCAAAT

Flanking Amino Acid:

ENDVSFSFIPITVLNRGSED

Intron Amino Acid Position:

313

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.1

0.45

1.3

59.2

45.1

Major BPS

0.47

1.2

61.1

45.5

Major PPT

52.8

0.06

44.8

36.3

Minor 5ss

-2.9

3.9

36.1

Minor BPS

43.5

-0.4

2.3

67.38

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006495

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040657

51224792 - 51259978

35187

ENSAPLT00000020606

51224792 - 51258543

33752

ENSAPLT00000006745

51213390 - 51258543

45154