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Intron Name: Anas_platyrhynchos_platyrhynchos_3_51375468_51376146_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

51375468 - 51376146

Intron Length:

679

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACTACAA

5'SS Class:

major

3'SS Sequence:

TGATCCACAACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TTGTTTTTGATC

Flanking Amino Acid:

YLNSVLTGKRSQEELNPSKL

Intron Amino Acid Position:

160

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.2

0.48

1.1

60.9

39.6

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

62.6

0.28

56.3

38.6

Minor 5ss

30.3

-2.3

3.2

39.3

45.9

Minor BPS

67.2

0.52

1.1

72.05

33.8

Associated Gene:

Gene:

VIP

Ensembl Gene ID:

ENSAPLG00000006708

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006972

51371643 - 51377922

6280