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Intron Name: Anas_platyrhynchos_platyrhynchos_3_51403941_51411041_F

Intron Information:

Intron Rank:

138764

Intron Class:

major

Intron Phase:

Intron Coordinates:

51403941 - 51411041

Intron Length:

7101

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAAGG

5'SS Class:

strong_major

3'SS Sequence:

AATTTTTCCTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTGTTTTAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.9

0.94

0.8

75.5

40.6

Major BPS

100

1.24

0.5

100

Major PPT

80.1

0.68

0.8

35.5

Minor 5ss

32.9

-2

2.9

40.4

45.3

Minor BPS

0.67

1.5

84.29

36.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024760

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021113

51403543 - 51413903

10361