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Intron Name: Anas_platyrhynchos_platyrhynchos_3_51403941_51414608_F

Intron Information:

Intron Rank:

138769

Intron Class:

major

Intron Phase:

Intron Coordinates:

51403941 - 51414608

Intron Length:

10668

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAAGG

5'SS Class:

strong_major

3'SS Sequence:

ATTTTTAATTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTATTTTTAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.9

0.94

0.8

75.5

40.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

76.9

0.61

0.9

37.6

Minor 5ss

32.9

-2

2.9

40.4

45.3

Minor BPS

0.99

87.98

30.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024760

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035620

51403543 - 51414730

11188