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Intron Name: Anas_platyrhynchos_platyrhynchos_3_51933600_51938666_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

51933600 - 51938666

Intron Length:

5067

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TTCTGGAAAGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTATTC

Flanking Amino Acid:

YMAQSQPPQLDQQKSSLTST

Intron Amino Acid Position:

169

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.6

0.96

0.8

27.7

Major BPS

96.5

1.15

0.6

34.2

Major PPT

61.2

0.25

1.1

56.2

42.5

Minor 5ss

38.8

-1.3

3.4

43.6

Minor BPS

67.3

0.52

1.5

77.16

33.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015652

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016324

51918034 - 51967194

49161